MUSCLE (3.7) multiple sequence alignment


NC_002645_HCoV-229E_inf-1_nsp10_      -AGKQTEFVSNSHLLTHCSFAVDPAAAYLDAVKQGAKPVGNCVKMLTNGSGSGQAITCTI
NC_005831_HCoV-NL63_AmsterdamI_n      -AGKQTELAVNSGLLTACAFSVDPATTYLEAVKHGAKPVSNCIKMLSNGAGNGQAITTSV
NC_002306_TGEV_PUR46-MAD_nsp10_1      -AGKPTEHPSNSSLLTLCAFSPDPAKAYVDAVKRGMQPVNNCVKMLSNGAGNGMAVTNGV
NC_003436_PEDV_CV777_nsp10_12192      -AGKQTEQAINSSLLTLCAFAVDPAKTYIDAVKSGHKPVGNCVKMLANGSGNGQAVTNGV
DQ811787_PRCV_ISU-1_nsp10_11884.      -AGKPTEHPSNSSLLTLCAFAPDPAKAYVDAVKRGMQPVNNCVKMLSNGAGNGMAVTNGV
AY994055_FIPV_79-1146_nsp10_1197      -AGKPTEHPSNSGLLTLCAFAPDPAKAYVDAVKRGMQPVTNCVKMLSNGAGNGMAITNGV
NC_009657_BtCoV-G1_BtCoV/512/200      -AGKQTEQATNSSLLTLCAFAVDPPKTYLDAVKSGHRPVGNCVKMLANGSGNGQAITNGV
EF203064_Bat-CoV-HKU2_HKU2/GD/43      -AGKQTELACNSSLLTLCAFAVDPAKAYVSAVKQGAKPVGNCVKMLANGSGSGQAVTNGV
NC_005147_HCoV-OC43_OC43_nsp10_1      -AGTATEYASNSSILSLCAFSVDPKKTYLDFIQQGGTPIANCVKMLCDHAGTGMAITVKP
NC_006577_CoV-HKU1A_N1_nsp10_131      -AGVATEYAANSSILSLCAFSVDPKKTYLDYIQQGGVPIINCVKMLCDHAGTGMAITIKP
AY884001_CoV-HKU1B_N2_nsp10_1307      -AGVATEYAANSSILSLCAFSVDPKKTYLDYIQQGGVPIINCVKMLCDHAGTGMAITIKP
DQ339101_CoV-HKU1C_N5_nsp10_1301      -AGVATEYAANSSILSLCAFSVDPKKTYLDYIQQGGVPIINCVKMLCDHAGTGMAITIKP
NC_003045_BCoV_BCoV-ENT_nsp10_12      -AGTATEYASNSSILSLCAFSVDPKKTYLDFIQQGGTPIANCVKMLCDHAGTGMAITVKP
NC_001846_MHV_MHV-A59_nsp10_1316      -AGTATEYASNSAILSLCAFSVDPKKTYLDYIKQGGVPVTNCVKMLCDHAGTGMAITIKP
NC_007732_PHEV_VW572_nsp10_12907      -AGTATEYASNSSILSLCAFSVDPKKTYLDFIQQGGTPIVNCVKMLCDHAGTGMAITAKP
EF424621_AntelopeCoV_US/OH1/2003      -AGTATEYASNSSILSLCAFSVDPKKTYLDFIQQGGTPIANCVKMLCDHAGTGMAITVKP
EF424622_GiCoV_US/OH3-TC/2006_ns      -AGTATEYASNSSILSLCAFSVDPKKTYLDFIQQGGTPIANCVKMLCDHAGTGMAITVKP
NC_004718_SARS-human_Tor2_nsp10_      -AGNATEVPANSTVLSFCAFAVDPAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTP
AY304488_SARS-civet_SZ16_nsp10_1      -AGNATEVPANSTVLSFCAFAVDPAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTP
NC_009694_SARS-bat_HKU3-1_nsp10_      -AGNATEVPANSTVLSFCAFAVDPAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTP
AY545919_SARS-badger_CFB/SZ/94/0      -AGNATEVPANSTVLSFCAFAVDPAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTP
NC_009019_Bat-CoV-HKU4_B04f           -AGANTEFASNSTVLTLVAFAVDPAKAYLDYVGSGGTPLSNYVKMLAPKTGTGVAISVKP
NC_009020_Bat-CoV-HKU5_LMH3f          -AGSNTEFAINSSVLSAVTFSVDPGKAYLDFVNAGGAPLTNCVKMLTPKTGTGIAVSVKP
NC_009021_Bat-CoV-HKU9_BF_005I        -AGSATEVASNSSILSLCSFSVDPEATYKDYLDNGGSPIGNCVKMLTPHTGTGLAITAKP
NC_001451_IBV_Beaudette_nsp10_11      SKGHETEEVDAVGILSLCSFAVDPADTYCKYVAAGNQPLGNCVKMLTVHNGSGFAITSKP
AY646283_IBV-partridge_Partridge      SKGYETEEVDSVGILSLCSFAVDPADTYCKYVAAGNQPLGNCVKMLTVHNGSGFAITSKP
AY641576_IBV-peafowl_Peafowl/GD/      SKGHETEEVDAVGILSLCSFAVDPADTYCKYVAAGNQPLGNCVKMLTVHNGSGFAITSKP
                                        *  **      :*:  :*: **  :* . :  *  *: * :***    *.* *::   

NC_002645_HCoV-229E_inf-1_nsp10_      DSNTTQDTYGGASVCIYCRAHVAHP----TMDGFCQYKGKWVQVPI-GTNDPIRFCLENT
NC_005831_HCoV-NL63_AmsterdamI_n      DANTNQDSYGGASICLYCRAHVPHP----SMDGYCKFKGKCVQVPI-GCLDPIRFCLENN
NC_002306_TGEV_PUR46-MAD_nsp10_1      EANTQQDSYGGASVCIYCRCHVEHP----AIDGLCRYKGKFVQIPT-GTQDPIRFCIENE
NC_003436_PEDV_CV777_nsp10_12192      EASTNQDSYGGASVCLYCRAHVEHP----SMDGFCRLKGKYVQVPL-GTVDPIRFVLEND
DQ811787_PRCV_ISU-1_nsp10_11884.      EANTQQDSYGGASVCIYCRCHVEHP----AIDGLCRYKGKFVQIPT-GTQDPIRFCIENE
AY994055_FIPV_79-1146_nsp10_1197      ESNTQQDSYGGASVCIYCRCHVEHP----AIDGLCRFKGKFVQVPT-GTQDPIRFCIENE
NC_009657_BtCoV-G1_BtCoV/512/200      EASTNQDSYGGASVCLYCRAHVEHP----DMDGFCKLRGKYVQVPL-GTLDPIRFVLENT
EF203064_Bat-CoV-HKU2_HKU2/GD/43      EANMNQDSYGGASVCIYCRAHVDHP----AMDGACRFKGKYVQIPI-GVNDPIRFCIENE
NC_005147_HCoV-OC43_OC43_nsp10_1      DATTSQDSYGGASVCIYCRARVEHP----DVDGLCKLRGKFVQVPV-GIKDPVSYVLTHD
NC_006577_CoV-HKU1A_N1_nsp10_131      EATINQDSYGGASVCIYCRARVEHP----DVDGICKLRGKFVQVPL-GIKDPILYVLTHD
AY884001_CoV-HKU1B_N2_nsp10_1307      EATINQDSYGGASVCIYCRARVEHP----DVDGLCKLRGKFVQVPL-GIKDPILYVLTHD
DQ339101_CoV-HKU1C_N5_nsp10_1301      EATINQDSYGGASVCIYCRARVEHP----DVDGICKLRGKFVQVPL-GIKDPILYVLTHD
NC_003045_BCoV_BCoV-ENT_nsp10_12      DATTNQDSYGGASVCIYCRARVEHP----DVDGLCKLRGKFVQVPV-GIKDPVSYVLTHD
NC_001846_MHV_MHV-A59_nsp10_1316      EATTNQDSYGGASVCIYCRSRVEHP----DVDGLCKLRGKFVQVPL-GIKDPVSYVLTHD
NC_007732_PHEV_VW572_nsp10_12907      DATTSQDSYGGASVCIYCRARVEHP----DVDGLCKLRGRFVQVPV-GIKDPVSYVLTHD
EF424621_AntelopeCoV_US/OH1/2003      DATTNQDSYGGASVCIYCRARVEHP----DVDGLCKLRGKFVQVPV-GIKDPVSYVLTHD
EF424622_GiCoV_US/OH3-TC/2006_ns      DATTNQDSYGGASVCIYCRARVEHP----DVDGLCKLRGKFVQVPV-GIKDPVSYVLTHD
NC_004718_SARS-human_Tor2_nsp10_      EANMDQESFGGASCCLYCRCHIDHP----NPKGFCDLKGKYVQIPTTCANDPVGFTLRNT
AY304488_SARS-civet_SZ16_nsp10_1      EANMDQESFGGASCCLYCRCHIDHP----NPKGFCDLKGKYVQIPTTCANDPVGFTLRNT
NC_009694_SARS-bat_HKU3-1_nsp10_      EANMDQESFGGASCCLYCRCHIDHP----NPKGFCDLKGKYVQIPTTCANDPVGFTLRNT
AY545919_SARS-badger_CFB/SZ/94/0      EANMDQESFGGASCCLYCRCHIDHP----NPKGFCDLKGKYVQIPTTCANDPVGFTLRNT
NC_009019_Bat-CoV-HKU4_B04f           EATADQETYGGASVCLYCRAHIEHP----DVSGVCKYKTRFVQIPA-HVRDPVGFLLKNV
NC_009020_Bat-CoV-HKU5_LMH3f          EANADQDTYGGASVCLYCRAHIEHP----DVTGVCKFKGKFVQVPL-HIRDPVGFCLQNT
NC_009021_Bat-CoV-HKU9_BF_005I        DANIDQESFGGASCCLYCRCHIEHP----GASGVCKYKGKFVQIPLVGVNDPIGFCIRNV
NC_001451_IBV_Beaudette_nsp10_11      SPTPDQDSYGGASVCLYCRAHIAHPGSVGNLDGRCQFKGSFVQIPT-TEKDPVGFCLRNK
AY646283_IBV-partridge_Partridge      SPTPDQDSYGGASVCLYCRAHIAHPGSAGNLDGRCQFKGSFVQIPT-TEKDPVGFCLRNK
AY641576_IBV-peafowl_Peafowl/GD/      SPTPDQDSYGGASVCLYCRAHIAHPGGAGNLDGRCQFKGSFVQIPT-TEKDPVGFCLRNK
                                      ...  *:::**** *:***..: **       * *  .   **:*     **: : : : 

NC_002645_HCoV-229E_inf-1_nsp10_      VCKVCGCWLNHGCTCDRT-----AIQ
NC_005831_HCoV-NL63_AmsterdamI_n      VCNVCGCWLGHGCACDRT-----TIQ
NC_002306_TGEV_PUR46-MAD_nsp10_1      VCVVCGCWLNNGCMCDRT-----SMQ
NC_003436_PEDV_CV777_nsp10_12192      VCKVCGCWLSNGCTCDRS-----IMQ
DQ811787_PRCV_ISU-1_nsp10_11884.      VCVVCGCWLNNGCMCDRT-----SMQ
AY994055_FIPV_79-1146_nsp10_1197      VCVVCGCWLTNGCMCDRT-----SIQ
NC_009657_BtCoV-G1_BtCoV/512/200      VCKVCGCWQANGCTCDRA-----VIQ
EF203064_Bat-CoV-HKU2_HKU2/GD/43      VCKVCGCWLNNGCSCDRS-----SVQ
NC_005147_HCoV-OC43_OC43_nsp10_1      VCRVCGFWRDGSCSCVSTDT---TVQ
NC_006577_CoV-HKU1A_N1_nsp10_131      VCQVCGFWRDGSCSCVGSSV---AVQ
AY884001_CoV-HKU1B_N2_nsp10_1307      VCQVCGFWRDGSCSCVGSGV---AVQ
DQ339101_CoV-HKU1C_N5_nsp10_1301      VCQVCGFWRDGSCSCVGSSV---AVQ
NC_003045_BCoV_BCoV-ENT_nsp10_12      VCQVCGFWRDGSCSCVSTDT---TVQ
NC_001846_MHV_MHV-A59_nsp10_1316      VCQVCGFWRDGSCSCVGTGS---QFQ
NC_007732_PHEV_VW572_nsp10_12907      VCQVCGFWRDGSCSCVSTDT---TVQ
EF424621_AntelopeCoV_US/OH1/2003      VCQVCGFWRDGSCSCVSTDT---TVQ
EF424622_GiCoV_US/OH3-TC/2006_ns      VCQVCGFWRDGSCSCVSTDT---TVQ
NC_004718_SARS-human_Tor2_nsp10_      VCTVCGMWKGYGCSCDQLREP--LMQ
AY304488_SARS-civet_SZ16_nsp10_1      VCTVCGMWKGYGCSCDQLREP--LMQ
NC_009694_SARS-bat_HKU3-1_nsp10_      VCTVCGMWKGYGCSCDQLREP--MMQ
AY545919_SARS-badger_CFB/SZ/94/0      VCTVCGMWKGYGCSCDQLREP--LMQ
NC_009019_Bat-CoV-HKU4_B04f           PCNVCQYWVGYGCNCDALRNN-TVPQ
NC_009020_Bat-CoV-HKU5_LMH3f          PCNVCQFWIGHGCNCDALRGT-TIPQ
NC_009021_Bat-CoV-HKU9_BF_005I        VCAVCNMWQGYGCPCSSLREI--NLQ
NC_001451_IBV_Beaudette_nsp10_11      VCTVCQCWIGYGCQCDSLRQPKSSVQ
AY646283_IBV-partridge_Partridge      VCTVCQCWIGHGCQCDALRQPKPAIQ
AY641576_IBV-peafowl_Peafowl/GD/      VCTVCQCWIGYGCQCDSLRQPKPSVQ
                                       * **  *   .* *          *